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Found 27 results
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Rost, Burkhard
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2014
Goldberg T
,
Hecht M
,
Hamp T
,
Karl T
,
Yachdav G
,
Ahmed N
,
Altermann U
,
Angerer P
,
Ansorge S
,
Balasz K
, et al.
LocTree3 prediction of localization.
Nucleic Acids Res. 2014 ;42(Web Server issue):W350-5.
Yachdav G
,
Kloppmann E
,
Kaján L
,
Hecht M
,
Goldberg T
,
Hamp T
,
Hönigschmid P
,
Schafferhans A
,
Roos M
,
Bernhofer M
, et al.
PredictProtein--an open resource for online prediction of protein structural and functional features.
Nucleic Acids Res. 2014 ;42(Web Server issue):W337-43.
Cejuela JMiguel
,
McQuilton P
,
Ponting L
,
Marygold SJ
,
Stefancsik R
,
Millburn GH
,
Rost B
.
tagtog: interactive and text-mining-assisted annotation of gene mentions in PLOS full-text articles.
Database (Oxford). 2014 ;2014:bau033.
2012
Schaefer C
,
Meier A
,
Rost B
,
Bromberg Y
.
SNPdbe: constructing an nsSNP functional impacts database.
Bioinformatics. 2012 ;28(4):601-2.
2010
Wainreb G
,
Ashkenazy H
,
Bromberg Y
,
Starovolsky-Shitrit A
,
Haliloglu T
,
Ruppin E
,
Avraham KB
,
Rost B
,
Ben-Tal N
.
MuD: an interactive web server for the prediction of non-neutral substitutions using protein structural data.
Nucleic Acids Res. 2010 ;38(Web Server issue):W523-8.
2009
Bromberg Y
,
Yachdav G
,
Ofran Y
,
Schneider R
,
Rost B
.
New in protein structure and function annotation: hotspots, single nucleotide polymorphisms and the 'Deep Web'.
Curr Opin Drug Discov Devel. 2009 ;12(3):408-19.
2008
Lippi M
,
Passerini A
,
Punta M
,
Rost B
,
Frasconi P
.
MetalDetector: a web server for predicting metal-binding sites and disulfide bridges in proteins from sequence.
Bioinformatics. 2008 ;24(18):2094-5.
2006
Schlessinger A
,
Ofran Y
,
Yachdav G
,
Rost B
.
Epitome: database of structure-inferred antigenic epitopes.
Nucleic Acids Res. 2006 ;34(Database issue):D777-80.
Bigelow H
,
Rost B
.
PROFtmb: a web server for predicting bacterial transmembrane beta barrel proteins.
Nucleic Acids Res. 2006 ;34(Web Server issue):W186-8.
2005
Graña O
,
Eyrich VA
,
Pazos F
,
Rost B
,
Valencia A
.
EVAcon: a protein contact prediction evaluation service.
Nucleic Acids Res. 2005 ;33(Web Server issue):W347-51.
2004
Liu J
,
Hegyi H
,
Acton TB
,
Montelione GT
,
Rost B
.
Automatic target selection for structural genomics on eukaryotes.
Proteins. 2004 ;56(2):188-200.
Liu J
,
Rost B
.
CHOP: parsing proteins into structural domains.
Nucleic Acids Res. 2004 ;32(Web Server issue):W569-71.
Nair R
,
Rost B
.
LOCnet and LOCtarget: sub-cellular localization for structural genomics targets.
Nucleic Acids Res. 2004 ;32(Web Server issue):W517-21.
Mika S
,
Rost B
.
NLProt: extracting protein names and sequences from papers.
Nucleic Acids Res. 2004 ;32(Web Server issue):W634-7.
Rost B
,
Yachdav G
,
Liu J
.
The PredictProtein server.
Nucleic Acids Res. 2004 ;32(Web Server issue):W321-6.
Wunderlich Z
,
Acton TB
,
Liu J
,
Kornhaber G
,
Everett J
,
Carter P
,
Lan N
,
Echols N
,
Gerstein M
,
Rost B
, et al.
The protein target list of the Northeast Structural Genomics Consortium.
Proteins. 2004 ;56(2):181-7.
2003
Carter P
,
Andersen CAF
,
Rost B
.
DSSPcont: Continuous secondary structure assignments for proteins.
Nucleic Acids Res. 2003 ;31(13):3293-5.
Y Y Koh I
,
Eyrich VA
,
Marti-Renom MA
,
Przybylski D
,
Madhusudhan MS
,
Eswar N
,
Graña O
,
Pazos F
,
Valencia A
,
Sali A
, et al.
EVA: Evaluation of protein structure prediction servers.
Nucleic Acids Res. 2003 ;31(13):3311-5.
Nair R
,
Rost B
.
LOC3D: annotate sub-cellular localization for protein structures.
Nucleic Acids Res. 2003 ;31(13):3337-40.
Eyrich VA
,
Rost B
.
META-PP: single interface to crucial prediction servers.
Nucleic Acids Res. 2003 ;31(13):3308-10.
Liu J
,
Rost B
.
NORSp: Predictions of long regions without regular secondary structure.
Nucleic Acids Res. 2003 ;31(13):3833-5.
Rost B
,
Liu J
.
The PredictProtein server.
Nucleic Acids Res. 2003 ;31(13):3300-4.
Kernytsky A
,
Rost B
.
Static benchmarking of membrane helix predictions.
Nucleic Acids Res. 2003 ;31(13):3642-4.
Mika S
,
Rost B
.
UniqueProt: Creating representative protein sequence sets.
Nucleic Acids Res. 2003 ;31(13):3789-91.
2002
Andersen CAF
,
Palmer AG
,
Brunak S
,
Rost B
.
Continuum secondary structure captures protein flexibility.
Structure. 2002 ;10(2):175-84.
Pollastri G
,
Przybylski D
,
Rost B
,
Baldi P
.
Improving the prediction of protein secondary structure in three and eight classes using recurrent neural networks and profiles.
Proteins. 2002 ;47(2):228-35.
Liu J
,
Rost B
.
Target space for structural genomics revisited.
Bioinformatics. 2002 ;18(7):922-33.