Publications

Found 20 results
Filters: Keyword is Membrane Proteins  [Clear All Filters]
2014
Yachdav G, Kloppmann E, Kaján L, Hecht M, Goldberg T, Hamp T, Hönigschmid P, Schafferhans A, Roos M, Bernhofer M, et al. PredictProtein--an open resource for online prediction of protein structural and functional features. Nucleic Acids Res. 2014 ;42(Web Server issue):W337-43.
Chang Y, Bruni R, Kloss B, Assur Z, Kloppmann E, Rost B, Hendrickson WA, Liu Q. Structural basis for a pH-sensitive calcium leak across membranes. Science. 2014 ;344(6188):1131-5.
2013
Pieper U, Schlessinger A, Kloppmann E, Chang GA, Chou JJ, Dumont ME, Fox BG, Fromme P, Hendrickson WA, Malkowski MG, et al. Coordinating the impact of structural genomics on the human α-helical transmembrane proteome. Nat Struct Mol Biol. 2013 ;20(2):135-8.
2012
Goldberg T, Hamp T, Rost B. LocTree2 predicts localization for all domains of life. Bioinformatics. 2012 ;28(18):i458-i465.
Kloppmann E, Punta M, Rost B. Structural genomics plucks high-hanging membrane proteins. Curr Opin Struct Biol. 2012 ;22(3):326-32.
Hopf TA, Colwell LJ, Sheridan R, Rost B, Sander C, Marks DS. Three-dimensional structures of membrane proteins from genomic sequencing. Cell. 2012 ;149(7):1607-21.
2010
Chen Y-H, Hu L, Punta M, Bruni R, Hillerich B, Kloss B, Rost B, Love J, Siegelbaum SA, Hendrickson WA. Homologue structure of the SLAC1 anion channel for closing stomata in leaves. Nature. 2010 ;467(7319):1074-80.
Love J, Mancia F, Shapiro L, Punta M, Rost B, Girvin M, Wang D-N, Zhou M, Hunt JF, Szyperski T, et al. The New York Consortium on Membrane Protein Structure (NYCOMPS): a high-throughput platform for structural genomics of integral membrane proteins. J Struct Funct Genomics. 2010 ;11(3):191-9.
2009
Bigelow H, Rost B. Online tools for predicting integral membrane proteins. Methods Mol Biol. 2009 ;528:3-23.
Punta M, Love J, Handelman S, Hunt JF, Shapiro L, Hendrickson WA, Rost B. Structural genomics target selection for the New York consortium on membrane protein structure. J Struct Funct Genomics. 2009 ;10(4):255-68.
2007
Punta M, Forrest LR, Bigelow H, Kernytsky A, Liu J, Rost B. Membrane protein prediction methods. Methods. 2007 ;41(4):460-74.
2006
Bigelow H, Rost B. PROFtmb: a web server for predicting bacterial transmembrane beta barrel proteins. Nucleic Acids Res. 2006 ;34(Web Server issue):W186-8.
2004
Bigelow HR, Petrey DS, Liu J, Przybylski D, Rost B. Predicting transmembrane beta-barrels in proteomes. Nucleic Acids Res. 2004 ;32(8):2566-77.
2003
Rost B. Prediction in 1D: secondary structure, membrane helices, and accessibility. Methods Biochem Anal. 2003 ;44:559-87.
Kernytsky A, Rost B. Static benchmarking of membrane helix predictions. Nucleic Acids Res. 2003 ;31(13):3642-4.
Zidovetzki R, Rost B, Armstrong DL, Pecht I. Transmembrane domains in the functions of Fc receptors. Biophys Chem. 2003 ;100(1-3):555-75.
2002
Rost B. Did evolution leap to create the protein universe?. Curr Opin Struct Biol. 2002 ;12(3):409-16.
Chen CPeter, Rost B. Long membrane helices and short loops predicted less accurately. Protein Sci. 2002 ;11(12):2766-73.
Chen CPeter, Rost B. State-of-the-art in membrane protein prediction. Appl Bioinformatics. 2002 ;1(1):21-35.
Chen CPeter, Kernytsky A, Rost B. Transmembrane helix predictions revisited. Protein Sci. 2002 ;11(12):2774-91.