Supporting online material
for:
Title
Fig.
1_Appendix

Fig. A1
:
Consensus sequences
increase number of true hits at any error rate. We sorted Max-BLAST and PSI-BLAST
alignments by e-value. The scores were generated by aligning a set of 2476
query proteins against each other.
True positive pairs belonged to the same SCOP superfamily while false
positive ones had different SCOP folds (see Methods). The logarithm scale of
the horizontal axis clearly shows that consensus alignments improve performance
at any error rate.