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CellCycleDB (Database of Cell Cyle Control Proteins in Eukaryotes)

Type the required information into the fields Description of field (click on description to get help)
Your email address [ watch typoz -:) ]
HTML formatted results HTML for printouts Return result in HTML (for WWW browsers)
Results on our website, NOT in email (the current default) Results not sent to avoid email floods
One-line name of protein (not necessary)


Paste, or type your sequence

 

  • amino acids in one-letter code
  • any number of white spaces allowed
  • non-standard amino acids to 'X'


     

  • use SRS6 to get your sequence from a public database

 

Final action

 

CellCycleDB Catalogues proteins invovled in the Cell Cycle Control Process through homology transfer from experimental annotations.

 

CellCycleDB allows the user to submit a protein sequence to determine estimates for involvement in the cell cycle process or search CellCycleDB for predicted cell cycle proteins among six eukaryotic proteomes. CellCycleDB is currently a first detailed analysis through homology assignment for identifying proteins functioning in the cell cycle process focusing on cell cycle control. Single sequence queries are evaluated against a trusted annotated data set of experimentally identified cell cycle control proteins. An overall accuracy estimate for invlovemnt in the cell cycle process based on HSSP-distance threshold values is presented for any specific query. CellCycleDB provides various accuracy levels for cell cycle function assignment of all proteins among six eukaryotic proteomes.

 
Who are we?
Current Reference: Wrzeszczynski, K.O. and Rost, B. (2004) Methods Mol Biol. 241: 219-33.

Email:  kaz@cubic.bioc.columbia.edu
Tel:    +1-212-305-4018 (Kazimierz O. Wrzeszczynski)
Fax:   +1-212-305-7932

 
August 2, 2004  
 
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