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Transmembrane helices for syny3 (Synechocystis PCC6803)

Jinfeng Liu & Burkhard Rost

CUBIC Columbia Univ, Dept Biochem & Mol Biophysics

num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN
185d10173406in98|ali|phd|phdHtm|60540-4.2543,78,162,184,269,291MLLSPQSNRQVLMAYLSPQW
186d10185966in47|ali|phd|phdHtm|24712-1.8625,62,105,159,187,233MKKYIAEFIGTFWLVLGGCG
187d10186816in19|ali|phd|phdHtm|34273-7.3346,107,161,223,261,320MQTYGNDTVQYEWWAGNARF
188d10111646in18|ali|phd|phdHtm|37193-11.5032,183,220,244,301,354MDWWKKLRRNSLARWGAILL
189d10185326in16|ali|phd|phdHtm|47292-10.1967,126,179,253,289,442MKTLSSLRRFSPVVTLSNTS
190d10186466in15|ali|phd|phdHtm|27075-7.4526,88,123,150,204,254MKHWKTYLVLVLLAIAMLLP
191d10181166in14|ali|phd|phdHtm|29895-11.9237,99,133,183,231,285MTASGSDRRWPRGATPYLFL
192d10195716in13|ali|phd|phdHtm|25857-5.3744,87,116,156,188,249MVNIFRIWAIAANGFREVIR
193d10114706in12|ali|phd|phdHtm|29895-9.3346,113,147,178,231,282MTKAVNKSNRTNNTNRKTEF
194d10108836in10|ali|phd|phdHtm|25494-10.0361,107,149,195,224,248MSTQLDNITSAETAPDYLDE
195d10185726in10|ali|phd|phdHtm|29095-13.4451,103,139,164,219,283MKSSAPSSLLAPLSFFRNGF
196d10188666in9|ali|phd|phdHtm|47831-3.3853,89,124,149,307,472MNKWFSKKFLATDIRAPHNF
197d10182246in7|ali|phd|phdHtm|27592-15.6544,108,135,162,215,260MASSTAGLRPRRKKNPLSFI
198d10182926in7|ali|phd|phdHtm|99860-6.9857,86,119,155,199,493MGKFLDLLQKYWLLPCLLLA
199d10190836in7|ali|phd|phdHtm|26230-3.6242,75,134,185,217,241MGHFPHKLRVLLSVYFAQMV
200d10180276in6|ali|phd|phdHtm|28094-12.2254,110,143,165,219,263MTIAQDKLSDYPSKESLKPT
201d10107706in5|ali|phd|phdHtm|31593-10.3830,159,183,210,268,291MKLDLFKWEKPAWIVSSLLV
202d10110066in4|ali|phd|phdHtm|26030-3.9068,90,138,160,222,260MEWWRRWYFLWGGDSVGAAI
203d10112206in4|ali|phd|phdHtm|23462-6.9044,80,111,146,180,212MFGKYRQKNLDNWHYRNLFW
204d10175576in3|ali|phd|phdHtm|58522-2.4979,124,228,258,292,324MSGAIPQGPRRIDTLKRREI
205d10177626in3|ali|phd|phdHtm|26352-5.6769,106,169,191,214,251MSDRGSRHSLSLWFQRLVAA
206d10188946in3|ali|phd|phdHtm|28321-2.9387,123,186,209,231,269MRLWFRPPYRPILQTPAMTQ
207d10109866in2|ali|phd|phdHtm|27510-1.2632,93,124,153,211,233MLNRARRSFSSMAPWAFCLI
208d10179766in2|ali|phd|phdHtm|31395-9.1063,90,149,191,244,286MSNQPSPGGLIKLSVGDVVS
209d10183286in2|ali|phd|phdHtm|25831-3.0737,75,132,203,225,255MDNSLLSEIWRQSLAFPWLS
210d10193936in2|ali|phd|phdHtm|19892-13.4134,68,97,136,160,187MSQNSKTALRATLQSQFSII
211d10112856in1|ali|phd|phdHtm|81170-7.4269,399,462,484,529,551MKAIFALRQAVASQLKKSTA
212d10183396in1|ali|phd|phdHtm|39402-0.0245,102,134,329,358,387MTMAVGTFKQSRFQLPLPRL
213d10186936in1|ali|phd|phdHtm|92910-1.83126,168,226,305,333,389MDFVEAEQMYYDWCQQLHER
214d10188776in1|ali|phd|phdHtm|31033-3.5335,57,99,131,174,196MTARLARPYAVLSIGAALAT
215d10189886in1|ali|phd|phdHtm|31760-6.50125,167,196,218,282,309MDFRRWIARRDQDWQTLDQI
216d10110756out148|ali|phd|phdHtm|661212.3958,136,181,261,283,371MTQAQAKRFQFDRQLWHRFV
217d10180346out61|ali|phd|phdHtm|972010.6799,294,326,783,844,932MGWKTIFVAPMNSSTTVWSI
218d10180236out58|ali|phd|phdHtm|233959.9234,80,117,151,191,231MTSPMGPTARDFWQNSRNSA
219d10174736out49|ali|phd|phdHtm|276646.8679,139,177,211,235,260MQGSLSWLLRFVEGQQLSSL
220d10114696out11|ali|phd|phdHtm|279949.7521,77,105,166,214,266MYVTPALLFLSAYLILPTLE
221d10194196out5|ali|phd|phdHtm|248858.7055,94,123,173,203,240MWQSLQNQLFFLQQWADRLV
222d10176786out4|ali|phd|phdHtm|242353.4840,88,142,166,197,223MSMFDFDLLFNSSFAVVLKI
223d10187326out4|ali|phd|phdHtm|222444.5323,79,113,150,174,196MTTALLLCLCLLLITYLMGS
224d10109996out3|ali|phd|phdHtm|2069213.5433,55,80,135,175,202MLTAFTAGLLLITVSELGDK
225d10185586out3|ali|phd|phdHtm|235808.2330,81,113,135,172,205MMDFQDTWALLHPAIAVVVV
226d10187096out3|ali|phd|phdHtm|458606.3942,78,103,189,377,405MTIANPSPSNFFQQLGRQCL
227d10191706out3|ali|phd|phdHtm|206838.4727,63,91,141,172,206MLTMGWSNILSLFGAMLILA
228d10193096out3|ali|phd|phdHtm|342303.1828,86,108,192,242,331MMAVDPNLFPLIAVIILGGS
229d10181306out2|ali|phd|phdHtm|222050.5724,65,95,143,180,211MVLNRLALACLWLALVIFAF
230d10177566out1|ali|phd|phdHtm|369000.7844,91,133,179,255,309MLTVYTQSDQALSWIERHGH
231d10179076out1|ali|phd|phdHtm|704202.6761,257,398,436,491,513MIIFMKFYSLPIVITSLWNL
232d10181735in254|ali|phd|phdHtm|61080-8.7052,103,191,213,291MNRASPMTQAVPGLWAVITT
233d10112635in208|ali|phd|phdHtm|58000-0.6840,77,167,264,290MAAPSVKQLLRYLTPHWRAI
234d10195015in178|ali|phd|phdHtm|73371-7.92202,239,320,342,426MVSLKQNLLGVKNRITCMAK
235d10173465in127|ali|phd|phdHtm|61300-0.2440,77,162,184,304MPPIYQLLWQMIRYAQKLYW
236d10108005in94|ali|phd|phdHtm|22245-4.2860,110,144,170,210MFSKEVTESKVFQWFNDRLE
237d10187055in59|ali|phd|phdHtm|19885-8.2544,81,114,155,192MESGNHLPHVEPTEEQEPDN
238d10183175in44|ali|phd|phdHtm|53010-1.9634,337,371,405,506MKGMVKLGHWGKTWRYYLLL
239d10113555in38|ali|phd|phdHtm|64240-4.0352,117,272,302,623MVVTPPSSAFRFSNLFKDHP
240d10113585in32|ali|phd|phdHtm|72160-6.33126,199,359,390,705MTQSSPLKTQQMQVGGMDCT
241d10190355in18|ali|phd|phdHtm|35910-1.1571,93,120,229,251MRLEISSPQTKLPYPKTEEL
242d10192305in14|ali|phd|phdHtm|157850-5.6941,221,258,563,882MSIMPPPPSSVPPHQGHGFW
243d10108885in9|ali|phd|phdHtm|21805-0.0634,73,134,162,199MGWEFFSLETLQELARQYGY
244d10115275in2|ali|phd|phdHtm|37933-3.6340,75,137,161,224MLSLSLGGQFMNNNIRVGSL
245d10189365in2|ali|phd|phdHtm|35921-2.7025,58,98,126,194MLDAVIILLSIFTFAGVGFA
246d10196105in2|ali|phd|phdHtm|23060-6.64111,140,162,184,219MGSVVNLGGSLFSLFLFYRT
247d10107235in1|ali|phd|phdHtm|22492-10.0034,78,122,168,223MSSTSPTSPYQSLVLRLLHG
248d10111335in1|ali|phd|phdHtm|32592-15.5235,88,131,157,183MVRRRSVPWIHRYSRFIMGA
249d10113275in1|ali|phd|phdHtm|41290-9.3346,265,302,331,353MFNSIRRLFDQFWNKSRTVK
250d10174365in1|ali|phd|phdHtm|28143-4.9820,51,80,225,276MHSILFAIAVLIAFGLRWAI
251d10174835in1|ali|phd|phdHtm|76591-11.6030,320,453,489,550MPMGCRFATVKRLILLGLLA
252d10175315in1|ali|phd|phdHtm|18225-2.5230,69,97,152,179MLESVADIFNAGAKYVIPFL
253d10181325in1|ali|phd|phdHtm|46302-0.59313,344,395,420,456MTEVTTTVRLNPDREELQKL
254d10184495in1|ali|phd|phdHtm|25844-4.54125,169,191,221,254MLGLGTKFSWFHWVTASGGN
255d10186335in1|ali|phd|phdHtm|36941-4.5446,74,181,234,256MLTAQSEYVKKLRPLLPPEA
256d10192355in1|ali|phd|phdHtm|35961-6.9268,90,181,231,253MLTAERIKFTQKRGFRRVLN
257d10192755in1|ali|phd|phdHtm|24402-0.5042,74,103,204,226MKLLSSGQLVAGVLFSGVAG
258d10114275out179|ali|phd|phdHtm|615818.3533,67,102,154,212MATDLTPLWISLKTAGLATV
259d10111095out15|ali|phd|phdHtm|507929.99114,158,216,255,470MGLPWYRVHTVVLNDPGRLI
260d10189025out15|ali|phd|phdHtm|351101.0275,97,121,225,247MTATIPPLTPTVTPSNPDRP
261d10182695out9|ali|phd|phdHtm|530303.78207,438,460,489,517MTIAAPKTTVAPEMKPTTPK
262d10183135out9|ali|phd|phdHtm|161313.2428,62,85,110,149MARSFSLAKNPLFWQVAIAG
263d10111515out6|ali|phd|phdHtm|318616.7282,104,128,228,304MLNPLNIEYLYLSKLFDNSL
264d10113235out6|ali|phd|phdHtm|209777.4140,69,126,149,188MADYLLNALQWIDGLGTWAA
265d10112355out5|ali|phd|phdHtm|205777.0340,71,138,161,196MSQWITEWIPQVMNQLGYGG
266d10110355out3|ali|phd|phdHtm|214858.1560,89,118,158,200MHIPDGLLPPQIVAGGYAVT
267d10184945out3|ali|phd|phdHtm|366515.0222,113,295,317,348MSVLAALAAIGVLAVLIAVH
268d10190275out3|ali|phd|phdHtm|194414.6436,72,108,137,179MSSSNSPSEMEPLSRTQILG
269d10183125out2|ali|phd|phdHtm|217616.2244,94,134,164,207MNTNPEPDLDLVTEEIELPK
270d10107825out1|ali|phd|phdHtm|206101.5031,98,136,161,184MSTLLGILAILSAAAAAGMR
271d10114835out1|ali|phd|phdHtm|474515.26171,338,376,406,428MNNNSLTDLDQTLDIISAIQ
272d10175325out1|ali|phd|phdHtm|217343.1432,70,120,166,199MLSPSGMGKFTLGVMLNYIW
273d10176185out1|ali|phd|phdHtm|197363.4223,50,102,149,187MADYAFFVFSFLAVLITIIL
274d10184115out1|ali|phd|phdHtm|212242.8143,72,109,153,196MARLSQELQDYFFKEDRGPT
275d10188645out1|ali|phd|phdHtm|519212.9076,104,188,225,510MGLATAPLGWTYVAWFGQIP
276d10189505out1|ali|phd|phdHtm|297000.3064,122,201,261,283MVRIIAKSQSFIGGIGGTIK
277d10193365out1|ali|phd|phdHtm|669414.46151,187,331,499,666MNAHEIALTLQKGLKALQNQ
278d10194385out1|ali|phd|phdHtm|395020.7822,202,324,346,371MVTFVLAITAISCLIWCFLL
279d10189984in216|ali|phd|phdHtm|101101-0.04467,508,595,697MSLTIADYQSFLREIEPFAQ
280d10113754in116|ali|phd|phdHtm|79091-12.98636,669,706,783MVMNQNNRPYIIVTNQGQSL
281d10115344in19|ali|phd|phdHtm|19896-10.1639,78,116,162MNLAEGVQYISFLILAFLVI
282d10188894in18|ali|phd|phdHtm|34634-3.8021,79,103,139MLEIVAAIFIVLLGSGICSC
283d10183494in11|ali|phd|phdHtm|16892-14.7830,75,111,155MNRTAKLTVAMVDWPLLVMG
284d10177264in10|ali|phd|phdHtm|44012-1.94237,337,374,420MDLTNWWQGATQWFGRSSQK
num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN
285d10192994in8|ali|phd|phdHtm|29892-11.3985,129,188,287MGKFNRALTFLKPWANIPNV
286d10107694in7|ali|phd|phdHtm|47243-4.98324,353,418,443MQRLRWLLLLIVVLVIGASF
287d10179914in6|ali|phd|phdHtm|19922-2.7938,75,135,179MPPGRSALMFNLADQTEILA
288d10113864in5|ali|phd|phdHtm|14597-12.2228,69,97,122MDYSHRIVNLWTVFLLAMLF
289d10175194in5|ali|phd|phdHtm|39322-2.53190,293,327,373MLPDKKLGSPNHRFHHWLVR
290d10113374in3|ali|phd|phdHtm|26333-3.0826,73,205,254MAILKQLGILFGLGIVGIVM
291d10189914in3|ali|phd|phdHtm|18317-1.3638,86,128,157MGLLFLKLMGHALGSIVMYW
292d10191634in3|ali|phd|phdHtm|39091-11.80264,293,353,378MVYFPLPSPATALTVPKLGE
293d10195914in3|ali|phd|phdHtm|40763-6.7541,302,355,386MIEFRESLKMATSMLLANKL
294d10182974in2|ali|phd|phdHtm|39801-0.5063,85,108,154MPNELSNLPPVLGSEETIAP
295d10192374in2|ali|phd|phdHtm|11696-13.7019,58,81,108MLQLLIVWIVTSVSLLIIAQ
296d10109804in1|ali|phd|phdHtm|20043-4.0431,56,118,155MGASFRAEPFLWIHLAGIVV
297d10110254in1|ali|phd|phdHtm|21751-5.0939,75,118,198MELIISWLRLSWQVLAINGD
298d10175034in1|ali|phd|phdHtm|44471-7.4542,93,292,342MAGNENIAEPQPVYTGTILY
299d10175634in1|ali|phd|phdHtm|19173-7.0346,83,132,179MNRRNTELANPIPQAALRAS
300d10181604in1|ali|phd|phdHtm|16018-1.3942,71,110,138MASNSTADGKDRFFSALIYV
301d10182954in1|ali|phd|phdHtm|19995-13.3647,84,126,177MTMNPLPLQKEAEKRSPRLN
302d10184304in1|ali|phd|phdHtm|29243-4.7649,87,128,270MGGKCLAKMAYSILRCSLEF
303d10186604in1|ali|phd|phdHtm|35092-13.8924,46,69,91MRIWTRTHWLLAILFLIVIS
304d10187334in1|ali|phd|phdHtm|59511-1.6728,56,96,588MARLTALFRTYGKYAFLPAI
305d10188544in1|ali|phd|phdHtm|38910-1.5733,311,333,362MNLGQWGEIMSWLCLLPISG
306d10189874in1|ali|phd|phdHtm|47942-4.6477,381,406,449MPQFPWKDNDAELSPLEAFL
307d10193394in1|ali|phd|phdHtm|15996-13.6421,61,119,144MFMIPAWLWIGLIAFALAFV
308d10193954in1|ali|phd|phdHtm|56160-6.8427,57,376,447MPLPRLLTIVLAVSFILGMV
309d10195354in1|ali|phd|phdHtm|16758-5.3825,75,108,146MKITEIVALVVTVAIATIVI
310d10195384in1|ali|phd|phdHtm|11197-18.0027,54,82,104MALIARLIGIVLIGTGIYFL
311d10195564in1|ali|phd|phdHtm|28293-12.0941,65,127,216MTAPVKAVKSLSQKFAPLRS
312d10179994out252|ali|phd|phdHtm|593020.8341,89,180,277MTKPIAPLLSLLNYSRVHRA
313d10180394out230|ali|phd|phdHtm|601020.2649,97,186,284MTPSPAAPPSDNDWRLLLRL
314d10108014out112|ali|phd|phdHtm|160434.2660,89,112,146MSIIKKPDLSDPDLRAKLAK
315d10192404out19|ali|phd|phdHtm|448828.4226,82,124,161MFSSSVELELFFIFVLVVLN
316d10192004out7|ali|phd|phdHtm|179030.8037,97,141,163MNIPNWVTVSRLLALPLLFL
317d10194494out4|ali|phd|phdHtm|479101.0651,94,125,402MPFVAIAFAKIFDTLDATTL
318d10110094out3|ali|phd|phdHtm|296717.5518,51,100,129MVNLLFLFFIMSFFPNNIFD
319d10113564out3|ali|phd|phdHtm|108252.8423,52,76,106MILRSLLYFVMAGLCEIGGG
320d10185354out3|ali|phd|phdHtm|201747.4349,122,148,194MGVNRLGIWFFSVSHSYCLL
321d10173864out2|ali|phd|phdHtm|124434.4339,61,92,121MAINTFTIISFIALGLIAGF
322d10176004out2|ali|phd|phdHtm|4779013.3324,50,74,96MLALMLSGAVALASLAFFFS
323d10178754out2|ali|phd|phdHtm|228020.70141,166,192,228MSALPIKHSRKFNQRRFRTM
324d10189894out2|ali|phd|phdHtm|410808.1221,90,113,399MAMAWLMGLGLALASVLWVE
325d10192174out2|ali|phd|phdHtm|154121.5827,51,103,151MYFLLVTLVILVFPLLSIAL
326d10194534out2|ali|phd|phdHtm|2659210.45110,148,187,234MHPNLPWLPSGLGLWSAHPT
327d10194574out2|ali|phd|phdHtm|383030.5836,280,329,362MKIPLAWHQLFHERMRLLAA
328d10195674out2|ali|phd|phdHtm|148373.2623,63,101,140MWISATVAYIHYLSFMVAFG
329d10195804out2|ali|phd|phdHtm|184414.4927,71,102,132MDVMDLPVLGSTLFFTIFSL
330d10108754out1|ali|phd|phdHtm|231555.9228,77,116,178MDHLFWIYILVFFAIILFRY
331d10109104out1|ali|phd|phdHtm|5019112.6239,82,117,153MSYLNLDTFMTLVLPKLLRM
332d10109354out1|ali|phd|phdHtm|149808.6127,62,95,118MPSLGCCYIMGGTVLWAIAA
333d10110554out1|ali|phd|phdHtm|1429610.6531,73,95,139MQNFFVIGFQSCLRLFGAFW
334d10175414out1|ali|phd|phdHtm|210050.7641,96,120,175MPKREYFSLPCPLSTFTMAY
335d10176764out1|ali|phd|phdHtm|274909.6643,106,203,225MLVCMAFSLGVTLVDGWGYK
336d10177334out1|ali|phd|phdHtm|205040.3646,68,107,185MTLLSKLLALFPGLVITLAL
337d10179924out1|ali|phd|phdHtm|2159314.0619,143,180,207MKIVYLIAALLFYAKMLFIT
338d10180424out1|ali|phd|phdHtm|275313.3232,204,237,263MAVHLPSSATRFSKNFVWLL
339d10182594out1|ali|phd|phdHtm|142303.3740,62,107,130MITRETLPVYLQRLWQNAMV
340d10185844out1|ali|phd|phdHtm|397303.1519,145,173,245MLILRRLILVVSLSFATIAI
341d10188734out1|ali|phd|phdHtm|453010.44152,331,371,409MNSPAPDPALSTAIASIQQS
342d10189924out1|ali|phd|phdHtm|275060.27106,147,190,248MTFSADRSPNTGIKAEITNS
343d10190914out1|ali|phd|phdHtm|1639714.9239,84,118,152MMFPLLALEIPEPIKIYSQF
344d10195174out1|ali|phd|phdHtm|670000.1478,288,310,352MDYFLVCGLGYLGQHCVVAL

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