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Transmembrane helices for human (Homo sapiens ( from SWISS-PROT))-- Low Reliability Report
Jinfeng Liu & Burkhard Rost
CUBIC Columbia Univ, Dept Biochem & Mol Biophysics
| num | id | nhtm | top | nali | ali|phd|phdHtm | len1 | riTop | riMod | topD | htmCN | seqN |
| 46 | cpa6_human | 3 | in | 134 | |ali|phd|phdHtm| | 494 | 2 | 0 | -2.92 | 24,317,459 | MLASGMLLVALLVCLTVMVL |
| 47 | q13120 | 3 | in | 130 | |ali|phd|phdHtm| | 494 | 2 | 0 | -2.81 | 23,316,460 | MLASGMLLVALLACLTVMVL |
| 48 | cpa7_human | 3 | in | 129 | |ali|phd|phdHtm| | 494 | 0 | 0 | -0.26 | 23,188,460 | MLASGLLLVALLACLTVMVL |
| 49 | cpad_human | 3 | in | 129 | |ali|phd|phdHtm| | 494 | 2 | 9 | -2.79 | 23,317,460 | MLASGLLLVTLLACLTVMVL |
| 50 | q9nx23 | 3 | in | 57 | |ali|phd|phdHtm| | 427 | 1 | 0 | -1.19 | 42,130,162 | MFFSMGFIVAVKGKIASPLE |
| 51 | o14575 | 3 | in | 29 | |ali|phd|phdHtm| | 238 | 0 | 1 | -0.81 | 67,103,166 | AGGSQVIFTNPLEIVKIRLQ |
| 52 | q14404 | 3 | in | 9 | |ali|phd|phdHtm| | 366 | 3 | 1 | -3.77 | 26,84,295 | MKKKLVVLGLLAVVLVLVIV |
| 53 | q9p109 | 3 | in | 5 | |ali|phd|phdHtm| | 453 | 7 | 9 | -7.84 | 37,194,312 | MKIFKCYFKHTLQQKVFILF |
| 54 | o75064 | 3 | in | 4 | |ali|phd|phdHtm| | 1386 | 9 | 0 | -9.33 | 228,362,1202 | MWQSSLGHWARKCPRATHAS |
| 55 | q14089 | 3 | in | 4 | |ali|phd|phdHtm| | 364 | 3 | 0 | -3.38 | 148,192,222 | DGCGHTVLGPESGTLTSINY |
| 56 | q9nx22 | 3 | in | 4 | |ali|phd|phdHtm| | 149 | 6 | 4 | -6.93 | 79,103,141 | MITLGDAVHNFADGLAVGAA |
| 57 | o15229 | 3 | in | 2 | |ali|phd|phdHtm| | 486 | 2 | 0 | -2.89 | 315,404,443 | MDSSVIQRKKVAVIGGGLVG |
| 58 | o95087 | 3 | in | 2 | |ali|phd|phdHtm| | 85 | 2 | 1 | -2.36 | 29,53,82 | MVAFSHSVGTSLCGVVFASI |
| 59 | q9ufj7 | 3 | in | 2 | |ali|phd|phdHtm| | 464 | 4 | 1 | -4.35 | 139,245,298 | LLEGGKGGIADSVAKWIFKQ |
| 60 | o60390 | 3 | in | 1 | |ali|phd|phdHtm| | 431 | 2 | 1 | -2.67 | 104,223,327 | KMAAPMEVAVCTDSAAPMWS |
| 61 | q13535 | 3 | in | 1 | |ali|phd|phdHtm| | 2644 | 1 | 0 | -1.33 | 140,223,2174 | MGEHGLELASMIPALRELGS |
| 62 | q9nu43 | 3 | in | 1 | |ali|phd|phdHtm| | 235 | 0 | 0 | -0.34 | 140,162,196 | MSSGEIECSNTLEDELDQAL |
| 63 | o75557 | 3 | out | 37 | |ali|phd|phdHtm| | 2023 | 2 | 0 | 2.67 | 225,783,992 | MRAAWLIKMTCAYYAAISET |
| 64 | q9und7 | 3 | out | 37 | |ali|phd|phdHtm| | 2023 | 2 | 0 | 2.67 | 225,783,993 | MRAAWLIKMTCAYYAAISET |
| 65 | o43378 | 3 | out | 34 | |ali|phd|phdHtm| | 216 | 1 | 1 | 1.61 | 43,142,196 | MRMLRLSCPRPSHQRQRDHR |
| 66 | q9ugy7 | 3 | out | 27 | |ali|phd|phdHtm| | 195 | 3 | 2 | 3.28 | 74,111,177 | VVNVLLTTPLWVVNTRLKLQ |
| 67 | cpv1_human | 3 | out | 10 | |ali|phd|phdHtm| | 502 | 0 | 1 | 0.95 | 38,321,453 | VLEMLNPIHYNITSIVPEAM |
| 68 | pspb_human | 3 | out | 7 | |ali|phd|phdHtm| | 381 | 3 | 0 | 3.93 | 222,244,266 | MAESHLLQWLLLLLPTLCGP |
| 69 | ptgi_human | 3 | out | 4 | |ali|phd|phdHtm| | 500 | 2 | 1 | 2.31 | 20,300,461 | MAWAALLGLLAALLLLLLLS |
| 70 | q9p2c0 | 3 | out | 4 | |ali|phd|phdHtm| | 439 | 6 | 0 | 6.73 | 36,108,324 | AAAGPSPSPGAGTMVLSVPV |
| 71 | q9ulq0 | 3 | out | 4 | |ali|phd|phdHtm| | 838 | 0 | 0 | 0.00 | 284,532,624 | LTSSMEDPAAPGTGGPPANG |
| 72 | q99685 | 3 | out | 3 | |ali|phd|phdHtm| | 313 | 5 | 0 | 5.17 | 141,163,185 | METGPEDPSSMPEESSPRRT |
| 73 | o76053 | 3 | out | 1 | |ali|phd|phdHtm| | 438 | 0 | 0 | 0.68 | 149,218,240 | LEEVPLEVLRQRESKWLDML |
| 74 | q13395 | 3 | out | 1 | |ali|phd|phdHtm| | 1621 | 4 | 0 | 4.24 | 998,1223,1293 | MEWVLAEALLSQSRDPRALL |
| 75 | q9np55 | 3 | out | 1 | |ali|phd|phdHtm| | 256 | 2 | 1 | 2.19 | 103,159,252 | MFQTGGLIVFYGLLAQTMAQ |
| 76 | q9nq59 | 3 | out | 1 | |ali|phd|phdHtm| | 1059 | 0 | 0 | 0.00 | 273,464,969 | ILVRRSSSPAELDLKDDLQQ |
| 77 | q9nw77 | 3 | out | 1 | |ali|phd|phdHtm| | 153 | 9 | 3 | 13.13 | 34,56,139 | MSWTFEYFVTKLDAVKILWK |
| 78 | q9nzt0 | 3 | out | 1 | |ali|phd|phdHtm| | 256 | 0 | 1 | 0.86 | 103,159,252 | MFQTGGLIVFYGLLAQTMAQ |
| 79 | q9p1e5 | 3 | out | 1 | |ali|phd|phdHtm| | 119 | 3 | 4 | 3.22 | 50,72,96 | MEENNYSLLASVCYSELRSN |
| 80 | q9p2d3 | 3 | out | 1 | |ali|phd|phdHtm| | 1586 | 4 | 0 | 4.86 | 309,1241,1304 | RCAERLNNLKTSPEAVSGYS |
| 81 | q9ugx7 | 3 | out | 1 | |ali|phd|phdHtm| | 309 | 3 | 0 | 3.55 | 146,235,282 | PTWNLLCRQRLQSRCPGCFL |
| 82 | q9ule8 | 3 | out | 1 | |ali|phd|phdHtm| | 1023 | 1 | 0 | 1.35 | 274,465,970 | TILVRRSSSPAELDLKDDLQ |
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